YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31432803, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASARAVAAM AMIFLLAALS TTHLASSLRP GAVAGGACRP SGYLPGKSYG RAIMFLGSAR  60
   61 RDYSLFVNIY FIFTNMSNTG DKEKETPVNT NGGNTASNSS GGPFLGSFSV VGFAAALKPH 120
  121 AFDGSNYKRW KTRALLWLTA MQCFYVSRGK RSEPPLSPEE EAKFEASDCL FRGALISVLA 180
  181 DNIVDVYMHM PSGKDMRDAL EAKFGVSDAG SELYVMEQFY DYKMVDDRSV VEQAHEIQML 240
  241 AKELENNNCE LPDKFVAGGI IAKLPPSWSD FATSLKHKRQ EFSVPDLIGS LGVEEKARAK 300
  301 DVRGKKVEGG SSANMVQKKN PHASHNNKKV KPDVKPKAAT NFKKKSKGKA KGDCFVCGKS 360
  361 GHWAKDCPER KDRKSANMII SEGGGTSGYG KILPTVLSVF HSPDWWVDTG ANIHVCADIS 420
  421 LFSSYQVGRG SSLLMGNGSL AAVHGVGTVD LKFTSGKTVQ LKNVQHVPSI KKNLVSGSLL 480
  481 CREDFRLVFE SNKCVVSKYG TFVGKGYDSG GLFRFSLNDM CNNHNAVNHI SENDESNVWH 540
  541 SRLCHVNFGC MTRLANMSLI PKFTLVKGSK CHTCVQSKQP RKPHKASEAR NLAPLELIHS 600
  601 DLCEMNGVLT KGGKKYFMTL IDDCTRFCYV YLLKTKDEAL HFFKIYKAEV ENQLERKIKR 660
  661 LRSDRGGEYF SNEFASFCEE FGIIHEMTPP YSPQSNGVAE RKNRTLTEMV NAMLDTAGLS 720
  721 KEWWGEAVLT ACHVLNKIPM KHKEVTPFEE WERKKLNLSY LRTWGCLAKV NVPIAKKRKL 780
  781 GPKTVDCVFL GYAIHSVGYR FLIVNSGVPD MHVGTILESR DATFFENEFP MKYTPSTSSK 840
  841 ETVMPHEHFA PIEHNDQTPE ENPEEDNIVD TRKSKRQRVA KSFGDDYIVY LVDDTPRTIE 900
  901 EAYSSPDADY WKEAVCSEMD SIMSNGTWEV VERPYGCKPI GCKWVFKKKL RPDGTIEKYK 960
  961 ARLVAKGYTQ KEGEDFFDTY SPVARLTTIR VLLALAASHG LLVHQMDVKT AFLNGELEEE1020
 1021 IYMDQPDGYV LEGQEGMVCK LLKSLYGLKQ APKQWHEKFD TTLTSAGFVV NEADKCVYYR1080
 1081 YGGGEGVILC LYVDDILIFG TSLNVIEEVK DYLSKSFEMK DLGEADVILN IKLQRGDEGG1140
 1141 ITLVQSHYVD KVLSRFGYSD CKPAPTPYDP SVLLRKNRRI ARDQLRYSQI IGSLMYLASA1200
 1201 TRPDISFAVS KLSRFVSNPG DDHWRALERV MRYLKGTMSY GIHYTGYPKV LEGYSDSNWI1260
 1261 SDADEIKATS GYVFTLGGGA VSWKSCKQTI LTRSTMEAEL TALDTATVEA EWLRELLMDL1320
 1321 PVVEKPVPAI LMNCDNQIVI IKVNSSKDNM KSSRHIKRRL KSVRKQKNSG VIALDYVQTA1380
 1381 RNLADQFTKG LPCNVIDSAS REMGLIPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle