YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63086964
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIFLLNIV ILFLTNVLTK KHVISNTLNF INVNPKQFNN STKRLKATEY KIDNKVIRGP  60
   61 LTPLNEYILI QKDEAGDTTD SGVFIGDTLK KNQYIGKVLS VGAGAINTKN GERIPIDIQV 120
  121 GDVVIFNPND GNKVKYNDKE CLLISNEEVL GKINDSNEIN PLNITPLYDR VLIKLINPNV 180
  181 NSDSLIIIPE SKNNDKVTDG QVVAIGNGIY DENNQKVPID LRIDDYIKFS PFSNESCEFT 240
  241 YQNAKYTFVK ARYVMAKY

Type	Start	End	Confidence
Signal Peptide	1	19	0.94
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	258	0.99