YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46107560, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILTKEEEE AHYSAVLKGG FIGGSLGLTV GLGGVFLASR RYPAFRGLTL PFRTFLVTSA  60
   61 GTFGAIINAD RWSMDFQKKQ NPMNFYEDQT QRAQQIVREN QTAMERFMEY GKENRYSIVF 120
  121 VSWLASMGVA FAMVSRSPMN TANKVVQARV YAQGLTLAVL IISAIFEVND AKKGEGRWQT 180
  181 VMVVDPNDPE HKRLIEKKIH KEEYEGQDLW KDMVAAEERR LAEKKQAQGS KA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.87
Transmembrane Helix	16	38	0.89
Non-Cytoplasmic	39	48	0.75
Transmembrane Helix	49	69	0.87
Cytoplasmic	70	115	0.90
Transmembrane Helix	116	135	0.94
Non-Cytoplasmic	136	149	0.79
Transmembrane Helix	150	168	0.84
Cytoplasmic	169	232	0.87