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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42545587, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPTGARLLV AAALLFPSVS PSPIFDAGQK VLDAITGARD SSTTTPHVQQ SSHFHPDEFY  60
   61 KAHASTAQGI ACHRGEGPAG IYGAETTDCD SPLELVNSTL DWIRNHVKDD IDFVVWTGDT 120
  121 ARHDSDEKRP RSASQVLEMN RRVAKKVVKT FSDDGVLTIP VIPTFGNNDF LPHNIFYAGP 180
  181 NKWLQSYSSI WRRFIPEQQR HSFGFGGWFE VEVIPNKLSV LSLNTMYFFD RNAGVDGCAI 240
  241 PSEPGFKHME WLSVQLQRLR DRGMKAILVG HVPPARTRNK QNWDETCWQK YTLWLKQYRD 300
  301 VVTGAVYGHM NIDHFLFQDT KDIDLGLYDK ADIYREPIEE DFSIESKSDY LMDLRKSWSN 360
  361 LPGEAAKAMG EDLNDDDDDI YTQDDEVDDM RNRKKGKGKK GKKKKGHGNI GGKYGERYQV 420
  421 SLVSPSVVPN YLPTIRIIEY DITGLENTPV WTDSFDVRTE AEEEVLPSFF EEEDNETHLE 480
  481 LKRDFEAERR HRKNRSRKSR KGNKGRKGRK GKKRPKNPEL VVPEDPPKGS LPGPAYSRQP 540
  541 FTFLGYTQYF ANLTYINNDM TDLTETSKWR DGDFSDEVPS HDKPRPKKFN YEVEYSTFTD 600
  601 KIFKLPDLTV RSYLRLASRI AKRKEKKGKG KLVEEYNEDF EDDSDDDDDV SDLPEYDDDN 660
  661 DDEEPESDFD STRKGKKKNN KRRKSNKVWK HFLREAFVST IPEKKLKKWS RG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle