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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46136983, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRIIPTRLK SVSRSSSSSS ATISVTNGNS KKNRSNSPPM RSKNDSTSPS RDAGNGLALR  60
   61 VWIIRGKDLA AKDRSGTSDP PPQYIIVSTG ESRIVTNDVP KTLNPEWNVS EEIPLTSVQN 120
  121 LLLSVICWDK DRFGKDYMGE FDLALEEIFN NGKVEQQPTW YRLKSKRPGK KTSVVSGEVQ 180
  181 LQFSLFDSTN PSATTQEILE KFQTLVGAAP AGSRNVTPSM TPNLGPNAAP QSTANPQDSP 240
  241 SDDDEFDEDD SDSSDSDSGD DQDQDPTKRK RRLRIRGLKK RRRNNPYAFA SNGFDTVGVI 300
  301 YLEVVKITDL PPESNLTRTS FDMDPFVVAS LGKKTYRTRR IRHNLNPVFN EKMLFQIQSH 360
  361 EQKYSFSFTV IDHDKYSGND FIASCNLPLH ELLERSPQAN PETGLYDLKV PAQAEALPSR 420
  421 SRFKKLAMSR SNSSSSISKM IRPPLSKHAS SGSTTTAVPA PAPTSNPNML APADALANTG 480
  481 ADPDSTAQDG GDSDFHEYTV PLKLKDLEKW EKKHNPILYL RAKYMPYDAL RQQFWRAMLR 540
  541 QYDADESGRI SRIELTTMLE ALGSTLTEAT IDTFFSRFPH RDADNEENWE LTMDEVVICL 600
  601 EDQLQGKRRS SATAGDKLKH LVPDMKNLLH VSRPGNNNSN GGSENPSVLD LSATSGTQTP 660
  661 ISNVPTLKTP ADEEGDPLDK SDSGDDRGEE HVVEIRECPI CHQPRLNKRK DADIITHIAT 720
  721 CASQDWRQVN SVLVGGFVTA SQAQRKWYSK VITKISYGGY KLGANSANIL VQDRLTGQIN 780
  781 EEKMSVYVRL GIRLLYKGLK SRDMENKRIR KLLKNLSVKQ GKKFDDPASK DEIEKFIAFH 840
  841 GLDMSEVLLP LEEFNNFNEF FYRALKPDAR PCSAPHNPHI IVSPADCRSV VFNSISTATK 900
  901 IWVKGREFNM KRLLGDAYPE DVSRFEGGAL GIFRLAPQDY HRFHIPVDGV MGKPKTIEGE 960
  961 YYTVNPMAIR SALDVYGENV RVLVPIDSEA HGRVMVICVG AMMVGSTVIT RNEGDKVQRA1020
 1021 EELGYFKFGG STILLLFEPG RMVFDDDLVD NGHDALETLV RVGMSVGHTP SEPQWTPDMR1080
 1081 KNAENITEAE KRTAKRRIQG NVALQDSPDG SGEEEQAARS AKPTIDTMAA SAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle