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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42547514, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEQPRAVD RTDSMDSNDG PKQPDKKKSR RPANTAFRQQ RLKAWQPILT PKTVLPLFFA  60
   61 IGIIFAPIGG LLLYASSQVQ EIRLDYTNCI VDASIRTKSG GNFTGMPSSA VSTAFKSSNS 120
  121 SVNAQWAREV NVSSTLDNGV KTFNPRCHLK FTIPEEMGPP VLFYYHLTNF YQNHRRYVLS 180
  181 FDREQLKGSK RSISDIRNSD CTPLYGEGNK PYYPCGLIAN SMFNDTFTSP ELTNPPGGGN 240
  241 DTWTYLMSNN SGISWDSDKD LYKKTEYSND DIVPPPNWQK RYPNGYTDEN PPPNLKNWEA 300
  301 FQVWMRTAGL PTFSKLYQRN NTQAMWPGTY DLVIDDHFPT REYKGSKSII ISTRTVVGGR 360
  361 NPFLGIAYVV VGGVCILLGT VFTVTHLIRP RKLGDHTYLS WNNAPGGKSG PSTAAASGRE 420
  421 LRPGEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle