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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46107906, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSRGLARA ALFAPRRSAT SFLLRQRINQ HTTRRQPLNR AWITTANPGD LASVPPIASS  60
   61 EDGADKSGHI STDSNEAILF FDNIFPLKLS SVLVRPWKSD HDVSDLLKRF ETSSLGVLDP 120
  121 IRLVKTAIPE DLPIRVTEIL PRLKDGGAYV KFKYNANIDP AEIEAQLGKR LREKPIKPWF 180
  181 SIFRPVNARL VQGTPWLEDM YRYPTSFVKI EFVPPSPGIT PEELPEETLY TLFRKYGKIA 240
  241 DIVPQPTDSK ITPRYAHIQF PVTRDAITAR NCMHGFIVNE ILGGGTKGTK LRLSFEKRVK 300
  301 AHSIWNWLSN HPRIVVPVVA ALIAGLSVLI FDPIREFFIK LHIQHSLEFK DSRIYKWFKK 360
  361 QSGNFGLSHK SKNDDGLEEV WNHRRDAIVE VQGWLDETSD TFIVITGPKG SGKVEMVMDQ 420
  421 ALEGRKNVLK VDCRRIVEAR GEAGTIKHLA MAVGYRPVFS WANNISSMID LAVQSTTGVK 480
  481 AGFSETLESQ LNKIMQTTTG ALKDVAVSSR SKKDSDYKLS EDAWLEAHPE RRPVVVVDNF 540
  541 LHKGEENSII YDKIAEWAAT VVQNNIAHVI FLTTDTAYSK PLDKALPDRI FRTVSLGDLA 600
  601 PEVAKNFVLS RVKDQLADDE KARKELGDDA PPAKAPIPRT NMRELDQCIG TLGGRLTDLE 660
  661 FLARRLRTGQ SPKQAVDEIV SETATDIVRI FLLGKPSDID GKNFSSQQAW HLVKSLAKNP 720
  721 KLRYNEVLLS TPFSSAAPAG SNADAAIDSL VSTELIAVKT HQGRPMTITA SKPLHQAAFT 780
  781 VLLQDRVLSA KMDYDTLNDA CKAEARSIEK VENELALLGT MPRQPGETAG RITFLLRKLE 840
  841 ASQAKIAKWD EEMIALKKLL SEEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle