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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46128323, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSNLNTTP SRADRDNASF LSPIAYDDDA SSLHSRSDQD TDTDDDELIS RARNSRELRA  60
   61 HDRIVLMEEE DIDRLVIDSR QKKERERRGS GLAVPNIGKM FGRRGSSSGN RSVNSSTENL 120
  121 VVEKRKTRRQ RRQKKREKLV EHAEHGEDGE LMYEMEEGGM KEGSSTGESS ERDDSDELDR 180
  181 HHLNMIAEAK TQRRRSWRRW VFIHSLIAIG FAIVLLLAWK LSKNRKSRNI KVNQTLVSNG 240
  241 TALFAPTSLI ISLDGFRADF LQRGLTPALN SFVSTGVSPK WMHPSFPSVT FPNHYTLATG 300
  301 LYPESHGIVS NTFWDPELQS EFYYTHPDQS LDPKWWGGEP FWVTAERQGV RSAIHMWPGS 360
  361 EAHVLNTEPS LMDKFNGKET LDNKVSRIME FLDMPGFEDK TLDASDVRPQ LIAAYVPHVD 420
  421 RDGHKFGPNT TEIRKTIQEV DSMIGKIFHG LEERNLTNIV NVIVVSDHGM ASTDISRLIQ 480
  481 LEDLIDTSKI EHIDGWPLYG LRPKNPDDLQ GLYDELKEKS KSNPNFQVYL RDVDMPERYH 540
  541 FSKHHRIAPL WIVPETGWAI VTKEEFDVED GKKKNLVYHP RGLHGYDHEH PLMRAIFIAR 600
  601 GPAFPHPANS QIDVFQNIEV YNMLCDSVGL TPAPNNGTLR LPLKPVGVHK PEDTPEEPED 660
  661 PPSASKESAR PTVPEKPSQP VRPTVHQKPT QPQRPTVPVA PTQSAKTTVS LKKPAKSSKS 720
  721 PAPSKGSDDQ DEDSDSDSDD DNDDKDKDEG VWDWFTHKVE KVWHKITGDD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle