YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46127799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRAQQTISL ALLVSSLYLA LFLELIPLPP LIQEQIVPVL PFWALVSFGA YLLFRLGFGI  60
   61 LTFNDVPNAH KELTAEIEQA KVELRKLGVT VD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.89
Transmembrane Helix	8	28	0.90
Non-Cytoplasmic	29	38	0.72
Transmembrane Helix	39	59	0.86
Cytoplasmic	60	92	0.88