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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46116506, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWSHLDITK PHLVYIILGG FTSLFMLCSS VIKERMYIGE ATVATLCGVI FGPHAANLID  60
   61 PQSWGSTDIV TVEFSRIVLV VQCFAVGVEL PKFYMERHWK SVVFLLIPVM TFGWLITSLF 120
  121 IFWMIPPLDW LDSLVVAACV TATDPVLASS VVGKGKFAKR VPKHLRDLLS AESGCNDGMA 180
  181 FPFIYLSLYL IQFKRDAQDV SFHFVVYVLL YECIFGAIYG FVIGYIARHG IRYAEKRDLI 240
  241 DRESFLVFYF VVALWCAGSG SILGMDDLLV GFAAGVGFSN DGWFGEKTEE SHVSNVIDLL 300
  301 LNLTYFVYFG TIIPWEQFNN GVFGLVAWRL VVIAIFVLLF RRIPIMLALK PFIPDVKTWR 360
  361 EALFAGHFGP IGVGAIFVAI LARAELEHEE PVPLAQLPPE NTEHYDLIYL VWPIVSFLVV 420
  421 TSILVHGSSI AVFTLGKRIN TLSLTMSYTA APEDGPSWMN RLPRISSQSR SQARSISEAS 480
  481 IDEEKGPQFP PDAAIPNSGP YSHLLRRQRD QNGSRSPSVV SRKRKNKNWD EDRGPGGPIA 540
  541 QSAIFPQRQS STPMSPNEQH DQEEFPSQDN TESTLAADDS SKERNSDRIE QAGESPVGSS 600
  601 GQKTPPQPVS IYEEGHEMIF ENQDGDVLDV EPAPDSHRED ENHVPITAVK PGHDKLWTVA 660
  661 GFKKRVGEVY NTEMEKRKDK GQDRRHEPAR AYQFGNTIIV EDADGEVVKT YELPAAKGGD 720
  721 SEAGPSTPGE KPAGKHGWAN FGGVFGGNHG NEQNNRKKSV AETQAADDKA IRFTIGGVGQ 780
  781 RMTKEDFIRE VQKLDSRTRK EVVEQSDASQ AVKKVAKQDL PPETAVKAAK AAEHHAPENR 840
  841 KGRSGSSASA AAPSSPAKPS EQQAETAIER KRRLAALSSQ EEEPKEETTE TPAERRRREA 900
  901 ALGVGNQADD SDDEGTERVP PNRRGITFAD STRPGRGRRA Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle