YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42544755, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLDWNDLL PLAYVAVLGG SLMAFSTIYR KRQAAESANL APWFGPHLQR NVYLSLLHLD  60
   61 DGSEKSPKVP ESVLRAALLR RAVEDIRRLI QVKSAKQACG SLLAKGSVGD DLWQRFQRAE 120
  121 KEMEEELRDV VTEANALAPN WGQSIFQSAH EMTANAAMRS SIEEILAQAD SEKQWWEKRR 180
  181 GQIQTEFMKE LDSEQSSSAK ATSEEDAVLV EDPSN

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.72
Transmembrane Helix	10	29	0.80
Cytoplasmic	30	215	0.73