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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42550753, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQYGVILDA GSSGTRVYIY KWKNHAKAAK DASAAELKAL PKIKLKENKK IHPGVSSFAE  60
   61 NPSQIGPDHL KQLIEIALDE VPDSKISETP VYLMATAGMR LLPKPQQSAL LKSMCSYLQE 120
  121 NTEFILPDCD AHIQVISGET EGLYGWIAAN YLLGGFDHPE EHDHGKNHHT YGFLDMGGAS 180
  181 AQIAFAPNAT ESAKHADDLK LVRMRTLDGS PAEYKVFTAT WLGFGANQAR SRYVERLQEH 240
  241 YNTDTTHELP DPCMPQGLRT TPDGELVEKI SDKTVLVGTG KFDECLRVTY PLLGKDKPCD 300
  301 DQPCLVNGQH VPGIDFDINH FVGVSEYWHT THGVFGKKHK AYDLATYQNS VMEYCSRDWS 360
  361 DIKNDLDKRK KSPEKKAEEA QLACFKASWL INMLYDGIGI PRVGLEGGAN NTVKDDGEKS 420
  421 FNDPFRPVDT VDGVELSWTL GKMVLYAAGQ VPPSSSELPV GFGSNVEKGI AEDFQHAGSS 480
  481 PIAPHTGDDD DDNDDFEDIL KKPGKSTGGV VAFIIIILLA AYLLRKPERR RKIFSMVKRR 540
  541 KRSGKSGRGS SLVSKIFGRR SGPSYERVME EGDYSDFELG DVDSDDNDHS DSSSNGSRKG 600
  601 RTSGLATPSA FAGRADELTR PPSAMDRAGL VVRTESRERL SPSLLSAGRK SRNGSPTRAK 660
  661 SPFMTALQED E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle