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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46116872, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSRHHAAAF SNGYPRGNTF DISPHKFQPR TYTPAQRRRN KLLTRLGICA VILFLFSLWL  60
   61 WPSSSVASLV SFGLLSSSGT PELETVRYYD LTNVQGTARG WEREERILLC VPLRDAEAHL 120
  121 EMFFSHMRNL TYPHHLIDLA FLVSDSKDNT LKVLSDSLEA IQADEDPKQP YGEISIIEKD 180
  181 FGQKVNQDVE SRHGFAAQAS RRKLMAQARN WLLSAALRPY HSWVYWRDVD VETAPFTILE 240
  241 DLMRHNKDVI VPNVWRPLPD WLGGEQPYDL NSWQESETAL ALADTLDEDA VIVEGYAEYA 300
  301 TWRPHLAYLR DPFGDPDMEM EIDGVGGVSI LAKAKVFRSG VHFPAFSFEK HAETEGFGKM 360
  361 SKRMGYSVIG LPHYVIWHLY EPSVDDIRHM EEMEKERLAR EQQEADKKKN QQKIKEEYTD 420
  421 TRNEWEKDKQ EMQNLAAQPK PVVNNAPVVP PPKEQPAQQV NNVPGNAAQG ENKPQAVKQE 480
  481 AMQVEEVAKD VPKAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle