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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46122243, gi|...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWDLLQRFL ESDVFNSNPF LPVSYLSRYA DHVGIHYVLC QKLRQFPYED IEFFLPQLCH  60
   61 LIISVHNESM ALEEFLMDLC EESVTAALLT FWLFQTYLHD LSSNPSSDSF QTCRRVYNKV 120
  121 QHIVFGLADT ARHEKITENV LPVTVLSSFV LASVALPMFP MWAGPLAVAQ ARKPQPVTND 180
  181 LQEPKENSKP SRARTVTAGN SRSRRAREST RTFSAPDPKG SRDSSPKPAR SPQPPPAIIP 240
  241 PQRSRTPANT TRPSALELRS LEGAKLSTSS LPLPSAQLPT RPTTPVSAGP TQHPSDSSNR 300
  301 RHSHHAKAIL AVNDLSPVQK TRLLRQHYFR SQTQFLTALE GISNRLVLVP KPARMSALRA 360
  361 ELALISQDLP AEVDIPVICP PTLVNGSPGK SRHHRIVRVN PAEATVLNSA EKVPYLIMVE 420
  421 VLRDDFSFDP DAPDNHRLLN NLLGVTSRAK RIFDLSDSPR LSPTVKTPEP TLDSVFEPAS 480
  481 GDLGSSPLLK GIDESPVRAS PRLAQSQNAQ RLPSGVVTAS TSTLDLTTPR SSGTGTSRSN 540
  541 SPGPISRRMT LPIQRSTPAD QPDFSALATH MRTASQMLAQ LEATSGKRPK QEVAAIRAKI 600
  601 IASMQSLEEK SFDVDEQGPT FDTIIAKAST TPIPVNNPDL EEDAQIDPNL NASAGRERME 660
  661 NDIKTGGVQR RGDRDDPSAA VFGEAWEAKK ERIRKSSPYG WMKNWDLVSV IVKTGADLRQ 720
  721 EAFACQLIDV CHKIWVDAGT DVWVKRMRIL VTGESSGLIE TITSGVSLHS LKRSLTLASV 780
  781 ESGQNPRNRI ATLRDHFLKA FGKPESKDFR AGVDAFKKSL AAYSIISYVL QLKDRHNGNV 840
  841 LVDSEGHIIH IDFGFMLSNS PGSVGFEAAP FKLTHEYVDV LGGPMSSDFE DYKRLCKQAF 900
  901 QALRRSADYI IDLVTMMGHD SSMPCFAVGI AQVTSTLRQR FQLHLSAEEA EHFVDDLVAK 960
  961 SFGSYYTRLY DTFQYRTQGI Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle