YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46121383, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLYLLPLST RRTLLYAKRL EVTTAPQGRT YVDKGTAWAA RTWAQWEKME SGWKRKVVDY  60
   61 GNYAFRRIPY EEWGLKSVPP LSSRRRGEDI QGRGKVELCF PSSVIPTNKA EGILQTLATE 120
  121 RQALHKKRLV WCIVGMPITI PFALIPIIPN LPFFYLVYRA WSHYRAIAGG KHIQWLLEHK 180
  181 LLRPSPSEKL DQLYALHAPP AEEPDNKERT LLTQKEVQTF SETLNMPALE VELERAIWQV 240
  241 EHAVLDPDPK SPPKEKAAGT AAENPGSTEP VEEKYKEKKD K

Type	Start	End	Confidence
Cytoplasmic	1	128	0.93
Transmembrane Helix	129	149	0.88
Non-Cytoplasmic	150	281	0.87