YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX16_GIBZE
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAFQSKKFR SAADMNSIGM RYRNLMNKHP FLMFGLPFLT VIVAGSFVLT PATAVRYERY  60
   61 DRKVRQMTKD EELNVRRSAR KVDMKEEYYR LAGKDLDDWE QKRVKRLPGE NDGLL

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.50
Transmembrane Helix	31	55	0.80
Cytoplasmic	56	115	0.50