YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42552010, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKLSKNPL PPSSSTLSSM SSASGASSLL PSSLADPSLP LPKLIVFDLD YTLWPFWIDT  60
   61 HVTPPLKPNS SHTSATDRYG EDYGFFSDVP AILYALPRAG IKIGVASRTS APSLARDLLK 120
  121 MLHITAPEGN TKEKPKKALD MFDGLLEIYP GCKIKHFESL QKRTGIKYED MLFFDDEARN 180
  181 RDTESLGVTM CLVKDGVTWD ELERGVTQWR NKRGYIKRPD AIELE

Type	Start	End	Confidence
Signal Peptide	1	35	0.97
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	225	0.99