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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42552611, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIAQWVST AALILGASAA DEASSVLTTE IGRQNNQSLF WGPYKSNLYF GVRPRTPDGL  60
   61 WTGLMWAKVD DYQDIQNGFR YTCEQGEDIH GYGWDEYDAR IGGVQSIHDK GNNIDLTTTF 120
  121 VKIPGGNHGG SWAARIKGEL REGAAKDTKT MLFYYIAQDG EGELDVEGEG TQFGFEDDVT 180
  181 FSGNSKTLGD YKLAVTKGTG KHPTSNNKLL EDRHGDKTIV SSPQDVPEDH TWQGKPVVFK 240
  241 KLQEAVSPVQ ENADQTDPPP PWQVYRIAHV PAKANVQIVE KTFEGPFEFD VIFSSASSGK 300
  301 EFNSEDVTEQ IKKTSEIFNE RFANTFKLKE PFNLEKYKKF GKSMFSNLVG GIGYFHGHQI 360
  361 IDRSYAPEYE EEDEEFWVEA ANARSRTKPD LEGPYELFTS VPSRPFFPRG FLWDEGFHLI 420
  421 PIADWDIDLT LEIVKSWYNT MDDNGWIARE QILGHEARSK VPPEFQVQYP HYANPPTLFL 480
  481 IIEGFMERLR AANGTEPQKL ERLIGADLLQ TAHLDNIELG ETYLRKLYPL LRRQYDWFRK 540
  541 TQRGDIKSYD REAYSTKEAY RWRGRTETHI LTSGLDDYPR PQPPSPSELH VDLMSWVGLM 600
  601 TKSLMNIADA LGMAEDVDEY KTNLEGIEHN LNDLHWSEKE GCYCDAMVDD YEEHALVCHK 660
  661 GYVSLFPFLV GLMKADDPKL GKILDLIGDE DHLWSPHGIR SLSKQDEFYN TGENYWRSPV 720
  721 WMPMNYLAVS QLQNVASQEG PFQAKAKDLF SRLRKNLVDT VYKSWEETGF AWEQYNPDTG 780
  781 AGQRTQHFTG WTSLVVKIMA MDDPSKEDHV RDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle