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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46123193, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDPPPNGF FEEKELKDFN LRQPPPSRNP SHISVQQSEP APESANSPKS PADKRNSAPA  60
   61 LDTFPTLQAP VVTNDSNSLR SPIGQRADAS RLDDNIELLR IERAVSADAR DDSSHLKHRA 120
  121 HNFEPEDAFN APIPSETMQR EKQPDADATL LKFWMFLRKF PRFVRYCLYL VPGAALLLIP 180
  181 VLLGKFALKD DGKRRDVNGV DLMWFGIWLE IVWGVLWVSR MISSILPPTF KLVAKLFGST 240
  241 NASKWKDIGY QLDLHTAVFL WFLAILISFE PTMMNHNFRD QKPHWVSIMN KVIIALFTLA 300
  301 ALNFVEKILI QWIAFTFHQR TYATRIDNNK ADVGQLVHLY EHAKAHNEKT DYFFQRGSGS 360
  361 ASGAQTPMQT LQDNARQIFD KVGYVAGRVG NDLIGRKIDS NHPRRVVNEL LRTTQTAHTL 420
  421 ARLIYRCAAK EGNDLVYQDD MERIFGSEEE AEVAFMMFDK DMNGDISIDE FEAVCNEIHL 480
  481 EKKAIAASLK DLDSVIKKLD KVFVFIIIII TIIVFISILS GSAAAALGSA GTVVLGLAWV 540
  541 LQATAQEFLQ SIIFVFVKHP FDVGDRVTVY GSTGDNMMGD DFYVTEISLL YTEFKKMQGH 600
  601 IVQAPNSLLN SLFILNQRRS NGLADVVPLV MRFGTPQHMI DDLKERMTEF CLANKRDYAP 660
  661 RIITEMVKVD DVRSCLMNMI FFHKTNFQNE LLRLNRHNKF VTELMTQMVN VGIQSPFRIE 720
  721 PGGSREHPMY WSGMQPPPYG KEPDHASGNG RGVDLHDKPV PHDRPLHSEG PPLSHVPSNY 780
  781 SARRGGAAAE RMRNMDQSFD FQDVFDNRRE NIQAHRLASI REKERGARAE DEAERRSMAS 840
  841 SSGVERRTST ESRRHVFNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle