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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42553257, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRYRIAIWL YCAATHVSDI DYIDSKRKLT VMQLSLQRRG PSARQRHGLG PVLGSSLVAL  60
   61 AALAPFTQAI TFNSVPSPNL DFSNLGRIGI VGDFDGISLY EYEGQNESPR NSNGSESLLA 120
  121 QLPNGAFTSI LSSDASIRAM CSFQLSNGEM QGVVIGGNFT SLDGTQSKAV ALFNPNTTKI 180
  181 TPLDGIEGEV NAVYCDQERD AVYVGGNFKG ANSTNAIAWV GTDGWTNLPF AGFNGPVKAI 240
  241 TKASNGHIIF GGTFTGLGNS SAPNESISQV INLSTANITD DNGSGTDPQD IVCPGSSSSP 300
  301 WLLQDSTPGY WEAAFSFGFE PTKLRLKNTR QDGRGTKTFR FVAYPIDGIM NLTYVDPESG 360
  361 NNVTCTSECP LLDNDEYQDF TFVNRVGMNR FRLAVSEWYG NGGGLEAIEL YQSDIYAYAI 420
  421 SDFNEPKCGG VKNPSSATHT GPWTVSPSLE SSSEYLVTEL NNDYDPESIS VTFYPNIMES 480
  481 GNYSVNIYTP GCRADDTCDS RGRVNITGIM SGDDGKDTNF TSQLFQTNYF DKYDQIYFGY 540
  541 IEKSSASFKP SVTLRPVGGQ EIDPLTIVAQ RVEFTLTNST GGLNGLFDFD PEQAVVNTSS 600
  601 LTNSPINKLG ASFDRSSGVS VLVTDSNTTY VGGNFTSKDH DNILAIIEND DVKEPGGGLN 660
  661 GEVFAMYLND TQLYVGGDFS NTDNGPVTGL DNVAVYDTKE DKWSPLGAGV DGPVKYAVPL 720
  721 MVNITADTPE LVIAFTGSFS SCNAFDDYSS ISVDGFAIWV ASKGNWLQNL DSNYPAFGGS 780
  781 LTAAVLDIPM DGGSLYAGAL SSAQLGAGGA ATLSDEGLGQ FPLNIRTSTS DSKSSSLSRR 840
  841 DVTSFDKNTT GVVTGIFYDD NDYNITVLAG HFTTESTKGE KIQNIALLED DTVTGLGSDI 900
  901 SNSSTFVALA VRDGILFAGG DISGTIDGTD IRGLVSYNLE SKSFNSQPAS VSGANGTVAA 960
  961 IAVRPGDSGD VYVGGSFETA GALDCPGLCT YNVNSGQWNR PGSQLEGTVF SLLWMSKNQL1020
 1021 VVGGDLRGNG SSQRYLSSWD ANAESWSNFP GSEDIPGPIS VISPGSSDYQ QLWVAGTSSK1080
 1081 DDSVFVMKYD GEKWHTVKPS LPSDTIIRGL QVFSVTEDHG DADLLDKDQV LMLTGSIDIP1140
 1141 DFGVASAALF NGTAYQPYAM TIKAGDGPGT IASIFSQRDS FFKEEKHMAL GFVVLIGLAI1200
 1201 ALGLMLLLVL CGIILDRIRK KREGYVPAPT SMYDRGSGMR HIPPHELLES LGHGRGGAPP1260
 1261 RV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle