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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46136475, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLKDLYGQ SGDKSQTSNF GVDFVIHYKV PPSERAEAEA GFVQLIQALT TVGLATEVRH  60
   61 GDSDSLLVFV KIASPDLFAK QVYRARLGDW LHGVRVSAPH NDVNQALEDE PVVEAERLRL 120
  121 IYLMITKPRD EGGAGITTTN SNWKYVDSVF PLHSHNFNKQ WIKKWSSKST LEQADIDEIR 180
  181 DKFGESVAFY FAFLRSYFRF LVFPAGFGFV SWLLLGQFSF LYALLCGLWS VVFFEYWKKK 240
  241 EIDLAVQWGV RGVSSIQQAR PEFEWDREAE DPVTGEAVKV YEPMKRIKTQ LLQIPFALAA 300
  301 VIALGALIVT CNSLEVFINE VYTGPGKQYL AFLPTVFLVL GTPTISGLLM SAAEKLNSME 360
  361 NYATVDAHDA ALIQKQFVLN FMTSYMALFF TAFVYIPFGH VLVPFLEFWR KTAQVVTFSD 420
  421 KELPTQNFQI NPARISNQMF YFTVTAQIVN FATEVVVPYV KREVFQKAKE LKSKPKIQDD 480
  481 HEEEAEFLER VRKECTLEVY DVSGDYREMV MQFGYVAMFS VAWPLAACCY LVNNWVELRS 540
  541 DALKIAISSR RPIPWRTDSI GPWLTALSFL SWLGSITSAS IVYLCSGARG HGVHGTPSPL 600
  601 KAWGLLLSIL LAEHFYLVVQ LAVRYVLSKL DSPGEQKERR ERFMTKRKLL EENIGQGASE 660
  661 KASVPGIDHS EKITRAALEE EARQTSIRGH GTPEEMFWQR QRGMNETIDV GRRMIEQQAA 720
  721 AQKNGQSKSP VPSMKAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle