YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42554705, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTKSKSSK PSSASKSQGG ISKLILVLGL LTALLSSVVY FVEQNLEQFY IFDLKHLDDL  60
   61 SKRALAKHGE DTRAVVKHIV DELSEKNPEH VNVKEEWVFN NAGGAMGAMY IIHASVTEYL 120
  121 IIFGTAIGTE GHTGRHTADD YFHILSGTQL AYVPGEYAPE VYPAGSIHHL RRGDVKQYKM 180
  181 PEGCFALEYA RGWIPPMLFF GFADGLSSTL DFPTLWDTTR ITGREMINNL IKGKL

Type	Start	End	Confidence
Signal Peptide	1	41	0.68
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	235	0.89