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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46124533, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDYSYDEQ GQFFPFFILT LTGIVTLPLT YTLLRPSRSD DALAPRIKTD YKPEHAATVD  60
   61 SLKTARKRSQ WRVKRAIFVV IGWALMAGMV YLIVVTQRTV PKIYNPYDIL GISESLNEKQ 120
  121 IKSHYKRLSL KFHPDKVRPD PAKNETVESL NDFYVELTKA YQSLTDEEVR NNYIQYGHPD 180
  181 GKQSFSMGIA LPQFMVADGS GKYVVLLYTL LLGVLLPWVV GSWWYGTMRM SKEGVLMESA 240
  241 NNLFRQYDDE IEEGGIITAL SVGKEFEAVV KGDKIETALS KIESRITADS DCQPTASGMS 300
  301 VKDKDALQDL DNGVRRKALA LLWAYLGRVE LDDPALTKAK LQTGPIARAL NQSFNAITLA 360
  361 YGNISPIANS FYTSQNLVQA VAPHASPLLQ LPHITPKIAS AIEGETKTHM PVHRFMDRPD 420
  421 AQRRQMAIGE GLLTEEQYET AIGVAKQIPF FRVCRAFFKV TGERFITPSS LVSLVIKGRF 480
  481 IPPGTDDVPA INELDLEDID PAEDDIEAIN GRKKKTIKGP DGKLIPIEEE SILPPLTHAP 540
  541 YYARDHSPQW HAFLSDSKQG KMAVPPFHFA KFDQPIIDDE GKPTFNMQTL KAQFAAPPQA 600
  601 GHYTFVLHVI CDAYVGFDTK MEVTLVVEEA SKAAEMVQED EISEPEEDSL AGQMHVLKTG 660
  661 QTPNTRRKDS DDSDDESGTD EEEDDDTSAT NTDTEDES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle