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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31442763
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEGDRNGG AEKKNFFKLN NKSKKDKKER KPTVSVFSMF RYSNWLDKLY MVVGTLAAII  60
   61 HGAGLPLMML VFGDMTDTFA NAGNLGDLGA LLFNNTNSSN ITDTVPVMNL EEDMTRYAYY 120
  121 YSGIGAGVLV AAYIQVSFWC LAAGRQIHKI RKQFFHAIMR QEIGWFDVHD VGELNTRLTD 180
  181 DVSKINEGIG DKIGMFFQSM ATFFTGFIVG FTRGWKLTLV ILAISPVLGL SAAVWAKILS 240
  241 SFTDKELLAY AKAGAVAEEV LAAIRTVIAF GGQKKELERY NKNLEEAKRI GIKKAITANI 300
  301 SIGAAFLLIY ASYALAFWYG TTLVLSKEYS IGQVLTVFFS VLIGAFSVGQ ASPSIEAFAN 360
  361 ARGAAFEIFK IIDNKPSIDS YSKSGHKPDN IKGNLEFRNV HFSYPSRKEV KILKGLNLKV 420
  421 QSGQTVALVG NSGCGKSTTV QLMQRLYDPT EGMVSVDGQD IRTINVRFLR EIIGVVSQEP 480
  481 VLFATTIAEN IRYGREDVTM DEIEKAVKEA NAYDFIMKLP QKFDTLVGER GAQLSGGQKQ 540
  541 RIAIARALVR NPKILLLDEA TSALDTESEA VVQVALDKAR KGRTTIVIAH RLSTVRNADV 600
  601 IAGFDDGVIV EKGNHDELMK EKGIYFKLVT MQTAGNEIEL ENAADESKSE IDTLEMSSHD 660
  661 SGSSLIRKRS TRRSVRGSQG QDRKLSTKEA LDESIPPVSF WRIMKLNLTE WPYFVVGVFC 720
  721 AIINGGLQPA FAVIFSKIIG IFTRNDDAET KRQNSNLFSL LFLVLGIVSF ITFFLQGFTF 780
  781 GKAGEILTKR LRYMVFRSML RQDVSWFDDP KNTTGALTTR LANDAAQVKG AIGSRLAIIT 840
  841 QNIANLGTGI IISLIYGWQL TLLLLAIVPI IAIAGVVEMK MLSGQALKDK KELEGAGKIA 900
  901 TEAIENFRTV VSLTQEQKFE HMYDQSLQVP YRNSLRKAHI FGITFSFTQA MMYFSYAGCF 960
  961 RFGAYLVAHS LMSFEDVLLV FSAVVFGAMA VGQVSSFAPD YAKAKVSAAH IIMIIEKTPL1020
 1021 IDSYSTEGLK PNTLEGNVTF NEVVFNYPTR LDIPVLQGLS LEVKKGQTLA LVGSSGCGKS1080
 1081 TVVQLLERFY DPLAGKVLLD GKEIKQLNVQ WLRAHLGIVS QEPILFDCSI SENIAYGDNS1140
 1141 RVVSQEEIVR AAKEANIHAF IESLPNKYST RVGDKGTQLS GGQKQRIAIA RALVRQPHIL1200
 1201 LLDEATSALD TESEKVVQEA LDKAREGRTC IVIAHRLSTI QNADLIVVFQ NGRVKEHGTH1260
 1261 QQLLAQKGIY FSMVSVQAGA KRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle