YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6856554
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFPPFKTI ATMISSPYSS FLLPRKSSFP PMPSLAAASV FLHPLSSAAM GDSSMDAVQR  60
   61 RLMFDDECIL VDENDKVVGH DTKYNCHLME KIEKGNMLHR AFSVFLFNSK YELLLQQRSA 120
  121 TKVTFPLVWT NTCCSHPLYR ESELIDENAL GVRNAAQRKL LDELGIPGAD VPVDEFTPLG 180
  181 RILYKAASDG KWGEHELDYL LFMVRDVGLD PNPDEVKDVK YVNREELKEL VRKADAGEEG 240
  241 VKLSPWFKLI VDNFLFQWWD RLHKGTLTEA IDMKTIHKLT

Type	Start	End	Confidence
Signal Peptide	1	48	0.99
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	280	0.99