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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40215525
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKSIKMRPQS AACLLLAIVG FVGATEWWES GNYYQIYPRS FRDSDGDGIG DLNGVTEKLQ  60
   61 YLKDIGFTGT WLSPIFKSPM VDFGYDISDF YQIHPEYGTM EDFERMIAKA KEVGIKIILD 120
  121 FVPNHSSTEN EWFTKSVDSD PVYKDFYIWH DGKINNETGE REPPSNWNSE FRYSAWEWNE 180
  181 VRQQYYLHQF AIQQADLNYR NPAVVNEMKN VIRFWLGKGV SGFRIDAVPY LFEVDLDRYN 240
  241 QYPDEPLTND SVNCPDPDDH CYTQHIYTQD MPETIDMVYQ WRELVDEFHV ENGGDKRLLM 300
  301 TEAYTSFENI MTYYGNGVRN GSHIPFNFDF LTSINNASKA GEYVEHIKKW MDAMPEGVYA 360
  361 NWVLGNHDNK RVASRFGVQR TDLINILLQT LPGHAVTYNG EELGMTDVWI SWEDTVDPNA 420
  421 CNSDPDNYYA RSRDPARSPY QWDASSKAGF TSADHTWLPV ADDYKTNNAL QQLRAPRSHL 480
  481 QIFKKLVRVR KEPSFRQGEL NIQAIDDDVI IYSRQKTGSD LYVIVLNLGS TSKTLDLTKY 540
  541 YELGTQAEVI TTSLSSQYID GDVIKSTEFV ANPYVGTVLV AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle