YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|225309, gi\|85...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILWSLIVH LQLTCLHLIL QTPNLEALDA LEIINYQTTK YTIPEVWKEQ PVQAIGEDVD  60
   61 DQDTEDEESY LKFGDDAEVR TSVSEGLHEG RFCRRTFDGR SGYASWPISG STSSESIGCM 120
  121 AIDICTHRNN VPVICCPLAD KHVLAQRISA TKCQEYNAAA RRLHLTDTVR TFSGKQCVPS 180
  181 VPLIVGGTPT RHGLFPHMAA LGWTQGSGSK DQDIKWGCGG ALVSELYVLT AAHCATSGAN 240
  241 HRTWFAWRPQ LNETSATQQD IKILIIVLHP KYRSSAYYHD IALLKLTRRV KFSEQVRPAC 300
  301 LWQCGAPHTT VVAAGWGRTE FLGAKSNALR QVDLDVSPQM TCKQIYRKER RLPRGIIEGQ 360
  361 FCAGYLQAQG HCQGDSGGPI HALLPEYNCV AFVVGITSFG KFCAAPNAPG VYTRLYSYLD 420
  421 WIEKIAFKQH

Type	Start	End	Confidence
Signal Peptide	1	27	0.70
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	430	0.99