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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|477323, gi|158806
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCYRKRHFL LWLLRAVCML HLTARGAYAT VGLQGVPTWI YLGLKSPFIE FGNQVEQLAN  60
   61 SSIPLNMTKD EQANMHQEGL RKLGTFIKPV DLRDSETGFV KADLTKRLVF DRPNNITSRP 120
  121 IHPIQEEMDQ KQIILLDEDT DENGLPASLT DEDRKFIVPM ALKNISPDPR WAATTPSPSA 180
  181 LQPNAKAIST IVPSPLAQVE GDPTSNIDDL KKHILFLHNM TKTNSNFESK FVKFPSLQKD 240
  241 KAKTSGAGGS PPNPKRPQRP IHQYSAPIAP PTPKVPAPDG GGVGGAAYNP GEQPIGGYYQ 300
  301 NEELANNQSL LKPTDTDSHP AAGGSSHGQK NPSEPQVILL NETLSTETSI EADRSPSINQ 360
  361 PKAGSPARTT KRPPCLRNPE SPKCIRQRRR EEQQRQRERD EWFRGQSQYM QPRFEPIIQT 420
  421 INNTKRFAVS IEIPDSFKVS SEGSDGELLS RVERSQPSIS SSSSSSSSSS RKIMPDYIKV 480
  481 SMENNTSVTD YFKHDVVMTS ADVASDREFL IKNMEEHGGA GSANGHHNDT TPTADAYSET 540
  541 IDLNPNNCYS AIGLSNSQKK QCVKHTSVMP AISRGARAAI QECQFQFKNR RWNCSTTNDE 600
  601 TVFGPMTSLA APEMAFIHAL AAATVTSFIA RACRDGQLAS CSCSRGSRPK QLHDDWKWGG 660
  661 CGDNLEFAYK FATDFIDSRE KETNRETRGV KRKREEINKN RMHSDDTNAF NIGIKRNKNV 720
  721 DAKNDTSLVV RNVRKSTEAE NSHILNENFD QHLLELEQRI TKEILTSKID EEEMIKLQEK 780
  781 IKQEIVNTKF FKGEQQPRKK KRKNQRAAAD APAYPRNGIK ESYKDGGILP RSTATVKARS 840
  841 LMNLHNNEAG RRAVIKKARI TCKCHGVSGS CSLITCWQQL SSIREIGDYL REKYEGATKV 900
  901 KINKRGRLQI KDLQFKVPTA HDLIYLDESP DWCRNSYALH WPGTHGRVCH KNSSGLESCA 960
  961 ILCCGRGYNT KNIIVNERCN CKFHWCCQVK CEVCTKVLEE HTCK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle