YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD3_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASARLLRA AIMGAPGSGK GTVSSRITKH FELKHLSSGD LLRDNMLRGT EIGVLAKTFI  60
   61 DQGKLIPDDV MTRLVLHELK NLTQYNWLLD GFPRTLPQAE ALDRAYQIDT VINLNVPFEV 120
  121 IKQRLTARWI HPGSGRVYNI EFNPPKTMGI DDLTGEPLVQ REDDRPETVV KRLKAYEAQT 180
  181 EPVLEYYRKK GVLETFSGTE TNKIWPHVYA FLQTKLPQRS QETSVTP

Type	Start	End	Confidence
Signal Peptide	1	19	0.59
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	227	0.99