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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|211718, gi|104643
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPSQVLAC AILGLLYQHA SGGLIKRIIR QKRETGLNVT LPEDNQPVVF NHVYNIKLPV  60
   61 GSLCSVDLDT ASGDADLKAE IEPVKNYEEH TVNEGNQIVF THRINIPRRA CGCAAAPDIK 120
  121 DLLSRLEELE GLVSSLREQC ASGAGCCPNS QTAEGRLDTA PYCSGHGNYS TEICGCVCEP 180
  181 GWKGPNCSEP ACPRNCLNRG LCVRAKCICE EGFTGEDCSQ ARCPSDCNDQ GKCVDGVCVC 240
  241 FEGYTGPDCG EELCPHGCGI HGRCVGGRCV CHEGFTGEDC NEPLCPNNCH NRGRCVDNEC 300
  301 VCDEGYTGED CGELICPNDC FDRGRCINGT CFCEEGYTGE DCGELTCPNN CNGNGRCENG 360
  361 LCVCHEGFVG DDCSQKRCPK TCNNRGRCVD GRCVCHEGYL GEDCGELRCP NDCHNRGRCI 420
  421 NGQCVCDEGF IGEDCGELRC PNDCQQRGRC INGQCECHEG FIGEDCGELR CPNDCNSHGR 480
  481 CVNGQCVCDE GYTGEDCGEL RCPNDCHNRG RCVEGRCVCD NGFMGEDCGE LSCPNDCHQH 540
  541 GRCVDGRCVC HEGFTGEDCR ERSCPNDCNN VGRCVEGRCV CEEGYMGIDC SDVSPPTGLT 600
  601 VTNVTDKTVN LEWKHENLVN EYLVTYVPTS SGGLDLQFTV PGNQTSATIH ELEPGVEYFI 660
  661 RVFAILKNKK SIPVSARVAT YLPAPEGLKF KSVRETSVQV EWDPLSISFD GWELVFRNMQ 720
  721 KKDDNGDITS SLKRPETSYM QPGLAPGQQY NVSLHIVKNN TRGPGLSRVI TTKLDAPSQI 780
  781 EAKDVTDTTA LITWSKPLAE IEGIELTYGP KDVPGDRTTI DLSEDENQYS IGNLRPHTEY 840
  841 EYEVTLISRR GDMESDPAKE VFVTDLDAPR NLKRVSQTDN SITLEWKFSH ANIDNYRIKF 900
  901 APISGGDHTE LTVPKGNQAT TRATLTGLRP GTEYGIGVTA VRQDRESAPA TINAGTDLDN 960
  961 PKDLEVSDPT ETTLSLRWRR PVAKFDRYRL TYVSPSGKKN EMEIPVDSTS FILRGLDAGT1020
 1021 EYTISLVAEK GRHKSKPTTI KGSTEEEPEL GNLSVSETGW DGFQLTWTAA DGAYENFVIQ1080
 1081 VQQSDNPEET WNITVPGGQH SVNVTGLKAN TPYNVTLYGV IRGYRTKPLY VETTTGAHPE1140
 1141 VGELTVSDIT PESFNLSWTT TNGDFDAFTI EIIDSNRLLE PMEFNISGNS RTAHISGLSP1200
 1201 STDFIVYLYG ISHGFRTQAI SAAATTEAEP EVDNLLVSDA TPDGFRLTWT ADDGVFDSFV1260
 1261 LKIRDTKRKS DPLELIVPGH ERTHDITGLK EGTEYEIELY GVSSGRRSQP INSVATTVVG1320
 1321 SPKGISFSDI TENSARVSWT PPRSRVDSYR VSYVPITGGT PNVVTVDGSK TRTKLVKLVP1380
 1381 GVDYNVNIIS VKGFEESEPI SGILKTALDS PSGLVVMNIT DSEALATWQP AIAAVDNYIV1440
 1441 SYSSEDEPEV TQMVSGNTVE YDLNGLRPAT EYTLRVHAVK DAQKSETLST QFTTGLDAPK1500
 1501 DLSATEVQSE TAVITWRPPR APVTDYLLTY ESIDGRVKEV ILDPETTSYT LTELSPSTQY1560
 1561 TVKLQALSRS MRSKMIQTVF TTTGLLYPYP KDCSQALLNG EVTSGLYTIY LNGDRTQPLQ1620
 1621 VFCDMAEDGG GWIVFLRRQN GKEDFYRNWK NYVAGFGDPK DEFWIGLENL HKISSQGQYE1680
 1681 LRVDLRDRGE TAYAVYDKFS VGDAKTRYRL RVDGYSGTAG DSMTYHNGRS FSTFDKDNDS1740
 1741 AITNCALSYK GAFWYKNCHR VNLMGRYGDN NHSQGVNWFH WKGHEYSIQF AEMKLRPSSF1800
 1801 RNLEGRRKRA 

YRC Informatics Platform - Version 3.0
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