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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TOC75_PEA
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTSVIPNRL TPTLTTHPSR RRNDHITTRT SSLKCHLSPS SGDNNDSFNS SLLKTISTTV  60
   61 AVSSAAASAF FLTGSLHSPF PNFSGLNAAA GGGAGGGGGG SSSSGGGGGG WFNGDEGSFW 120
  121 SRILSPARAI ADEPKSEDWD SHELPADITV LLGRLSGFKK YKISDILFFD RNKKSKVETQ 180
  181 DSFLDMVSLK PGGVYTKAQL QKELESLATC GMFEKVDMEG KTNADGSLGL TISFAESMWE 240
  241 RADRFRCINV GLMGQSKPVE MDPDMSEKEK IEFFRRQERE YKRRISSARP CLLPTSVHEE 300
  301 IKDMLAEQGR VSARLLQKIR DRVQSWYHEE GYACAQVVNF GNLNTREVVC EVVEGDITKL 360
  361 SIQYLDKLGN VVEGNTEGPV VQRELPKQLL PGHTFNIEAG KQALRNINSL ALFSNIEVNP 420
  421 RPDEMNEGSI IVEIKLKELE QKSAEVSTEW SIVPGRGGRP TLASLQPGGT ITFEHRNLQG 480
  481 LNRSLTGSVT TSNFLNPQDD LAFKMEYAHP YLDGVDNPRN RTLRVSCFNS RKLSPVFTGG 540
  541 PGVDEVPSIW VDRAGVKANI TENFSRQSKF TYGLVMEEII TRDESNHICS NGQRVLPNGA 600
  601 ISADGPPTTL SGTGIDRMAF LQANITRDNT RFVNGTIVGS RNMFQVDQGL GVGSNFPFFN 660
  661 RHQLTVTKFL QLMSVEEGAG KSPPPVLVLH GHYGGCVGDL PSYDAFTLGG PYSVRGYNMG 720
  721 EIGAARNILE LAAEIRIPIK GTHVYAFAEH GTDLGSSKDV KGNPTVVYRR MGQGSSYGAG 780
  781 MKLGLVRAEY AVDHNSGTGA VFFRFGERF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle