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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11359651
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVLQGRDI ALAAIAAFIS WGYAVHWFPA IRWANYAFAA GVLVTLVGLL ALLMLTSRGS  60
   61 HHHRLRPPPR PHGAAFVAPG SWSKEVAALR ARQTSTKAPL YPESPKVSAA LDEVLGYVIR 120
  121 DFIQVWYSSI SKNPVFTDEV DKAIRGAILT VRDRLAQLDL ATILTTRLVP ILTAHFRDVY 180
  181 EAEKSVRGRK LNRSVTETDE LDLAIASKYR DGKLHPAATL SFSDTKTTQQ DYLRKVMVRI 240
  241 LPKILPKSML ASGAVSAIVR EITACAVMFP IMRMLSDPDT WNQLMENYGR SMLQDRSTVR 300
  301 KLRAALDQHA SPAPRVNKPV AFPRMIPGDN ERKFEKFIRA IRKTNNLSDA RRFRSEVAIQ 360
  361 IKRDSQQENV DQVYLRRLEM GKRLLDQKVH HLAAGGDRRA LPPQTTALPT PTVSRLENAS 420
  421 LTDVLRDPSS LSYFMEYMDR QRLMPLVQFW LVVDGFRNPL EDDGPEGEQL PLQLPPWTDS 480
  481 DRLDLAQIEA AYLSRPELKV PDSSKRTIQE FLRAGRRASP EQYYKARRAV LRAQSAVLEE 540
  541 MKAKHFGNFR KSDLFYKALA SEEASKSMVA PVSGSSTPGP SVARASSFTS KPNPQLRMAL 600
  601 RLPPGARNRG AGGSADMPRP MTAKEPEKPS LASLGLVSAA SRIGVFIDDD LFADENRFLS 660
  661 DEHEYSDENK DDDEIDEVHE AAPGDLGLAE AITVLSNDID RLVAQDAVVD SLLKKAELTN 720
  721 NTAELRILRK SKASLQREIR RKELQRQQYV IQESDNSLYG RSTIKIKNIH VGREEDGKEF 780
  781 AMYAIEVLRN AGEKMPAATW TVTRRYSEFL ELHQKLRSQY SSVRNLDFPR RRMVMKLQND 840
  841 FLQKRRVALE KYLNQLLLLP DVCHSRELRT FLSQSTITPT TATHGQTSSL EDSKKDMMTR 900
  901 LYDSVADGME DILGNIPVLD QLSLAGQNLL AAATNQQLAA ASAAGAGGDD VVTAAEAEAE 960
  961 LNAFELTNDK ELEPFVKPIC DIFLEVFELN RGNNWLRGRA VVVVLHQLLG GTIERKLRDN1020
 1021 VRMLVAEDAL LRYINLVKDG MWPSGELASN KPPRTAQEKA RTKTEASLML ATLVPDLAAS1080
 1081 VVGRLNAQAA SRRIFATFNN ERLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle