YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145640300
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIILLGAPG AGKGTQAQFI MNKFGIPQIS TGDMFRAAIK AGTELGKQAK ALMDEGKLVP  60
   61 DELTVALVKD RIAQADCANG FLLDGFPRTI PQADALKDSG VKIDFVLEFD VPDEVIVERM 120
  121 SGRRVHQASG RSYHIVYNPP KVEGKDDVTG EDLIIRADDK PETVLDRLAV YHKQTSPLID 180
  181 YYQAEAKAGN TQYFRLDGTQ KVEEVSQELD KILG

Type	Start	End	Confidence
Signal Peptide	1	17	0.87
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	214	0.99