YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1074093
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKIIITNLK KINHLRGKIM SKIEISNDTR IIRHRTPARI SHWMLVICFF MTMFTGVAFF  60
   61 FPDFAWLTEI LGTPQIARAI HPFTGILMFF AFIYLALLYW DHNIPEKNDI RWAKGVIEVL 120
  121 KGNEHAVADN GKYNLGQKML FWTLNLAMVT LLVTGIIMWR QYFSHYFSIP VLRIAILLHS 180
  181 ASAFMLFTGI LVHIYMAFWV KGSIRGIVEG WVTVRWAKKH HPRWYREEVL SKLEEDLLNE 240
  241 QSGKVGKTKV LFKGFGK

Type	Start	End	Confidence
Cytoplasmic	1	39	0.99
Transmembrane Helix	40	61	0.94
Non-Cytoplasmic	62	78	0.89
Transmembrane Helix	79	100	0.92
Cytoplasmic	101	139	0.96
Transmembrane Helix	140	159	0.95
Non-Cytoplasmic	160	174	0.80
Transmembrane Helix	175	197	0.91
Cytoplasmic	198	257	0.98