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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30248923, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSNISDLPH TVPPDFPSHW QTWIGPILNE HEQIHAWLET DLDGQLNFSS GLVVITTHRI  60
   61 FSRMANDENW QVWPCRQDMK LTYQDHAGVC SIELSDTHAR LACWHCTLGR HQAVDQLITH 120
  121 FSRLITAHDA ATELTGSNVA DNESASESSP ASDQEATATP PSTWTLFRLW RFARPYKWQL 180
  181 LIGFILMLGS TAAALVPPYL TMPLMDNVLI PYQNGHPIDV DLVTFYLSGL LAAAILAWIL 240
  241 GWLRTYTLAR VSERIGADLR TTTYEHLLSL SQAYFGGKRT GDLMARIGAE TDRINLFLSL 300
  301 NLLDFATDVL MITLTVIILV SINPWLALIT LLPLPIIAWL IHLVRDRLRV GFEKTNRVWA 360
  361 EVNNVLADTL PGIRVVKAFA QEEREIERFR TVNQRNVEIN DRVNKVWALF TPTVTLLTEC 420
  421 GLLVVWIFGI WQVSQDHITV GVLTAFLAYI GRFYLRLDSM SRIVSATQKA AAGTKRIFDI 480
  481 LDHVSSVPEP VKPVHLPVMK GHIELRNVSF RYGTRRVIQN LDFTIEPGEM IGLVGHSGSG 540
  541 KSTLINLICR FYDVTDGSIL IDGVDIRALP IAEYRKHIGL VLQEPFLFFG TIAENIAYGK 600
  601 PGASRKEIIA AARAAHAHEF ILRLPYGYDS LVGERGQALS GGERQRISIA RALLIDPRIL 660
  661 ILDEATSSVD TQTEQEIQGA LDNLVSGRTT IAIAHRLSTL QEASRLVVLD HGRIVETGNH 720
  721 EELMARQGHY YQLYQSQSRS SDDENRPDTS EKIMDIRGNR V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle