YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48733063, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFTLLASL LLLAGCASGP RFDTSHPSVN HDSRVQFVIV HYTSASLERS LQLLTHGEVS  60
   61 SHYLIGDDKS ATIYKLMDEN LRAWHAGESE WQGRTWLNSS SIGIEIVNPG FKDTPTGRLW 120
  121 YPYSEAQVQS LIVLLKDISK RQGISPRHII GHSDIAPLRK LDPGPLFPWK RLAAEGLGLW 180
  181 PNEQAVARQQ AQFDAELPSI TWFQSQLARL GYSTPQTGEL DVATRHVLAA FQMHYRPARF 240
  241 DGTPDAQTAA LLLVLNQTK

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	259	0.99