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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|93354494, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSHFFIDR PIFASVLSII IVVGGLVAMV NLPIAQFPDI TPPTITVTTT YPGASSDVVA  60
   61 QNVAAPIEQQ VNGADNMLYM SSTSSSTGNM TLTVYFEIGT DPSLAQVDVQ NRVNLALPTL 120
  121 PDAVTKQGVS VQKRSSAFMM VIAVYSPDNS YPQTFVDNFT NIYILDALKR IPGANQASIF 180
  181 GTPDYAMRIW LKPDRMAQLG ITVEDIKNAV ANQNEQFSAG RIGQSPTDGP VTLTFPVTTK 240
  241 GRMTEPAEFE NIILRAASGD AALVRLKDVG RAELGSKDYS LRSRYKGKTA TLLAVYQQPG 300
  301 ANALAVAEQV RKTLEEVKKS FPPGMEYEVA LDTTEFVHES INEVVHTLRD AVILVILVVF 360
  361 LFLQSFRATL VPILAVPVSI IGTFMAMSAF GFSVNMLTLF GMVLAIGIVV DDAIVVIENV 420
  421 ERNMVEFKMP PKEAAKHAMD EVGGPVIAIV LVLLAVFIPV AFLSGITGQL YKQFAITLAV 480
  481 SVLLSGVVAL TLSPALAAIL LKPGSHEKNR FFRWFNRSFD RLVEGYGRAI QLIIRRSVIS 540
  541 LAIVAALIAV SVLMFMRIPS SFLPVEDQGY LLGAVIMPDA ASLDRTSALS SRAADWFSKQ 600
  601 PGVKAVAVPD GYSLIDSQNK SNAGTLFVTL KGFGERGKGE SAADLIAKAN KEFSTYREGV 660
  661 VVPVNPPSIP GLGTTGGFEF WLQSTGDGTY PQLEERVRAF IAKAHQRPEL RGVTSTINTR 720
  721 SRQLLVDLDR ERAETQGVAV ESVYSALQTM FGSLYVSQFP KNSRLFQVIL QAEPKYRSRP 780
  781 DDLDNVYVRN AKGDMVPIKA VTNSRWVSGA DLVTRFNNFP AAKITGDAAP GYSSGQALAA 840
  841 MEEVAHEVLG EGYSFAWSGQ AYEEKKAGST AALVFAFALL MVFLILAAQY EKWSLPLGVL 900
  901 LAVPFALFGA LMGILLRGME NDVYFQIGLT VLIALAAKNA ILIFEFAVEM QEKEGLSPFE 960
  961 AAVKAAKMRL RPIIMTSLAF ILGCVPLAIA SGASAASRQS LGTGVIGGML GATVIAIFFI1020
 1021 PMFFWGLEQR SEKRKGKQPA SGAGTGPGAG PASDTEATPG GTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle