YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91687303, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHQGTGLAG RAKTLIVALA LGAAGALGVM AQAHAADTTL LNVSYDPTRE LYQDINQAFG  60
   61 KQWKAKTGDT ITFKQSHGGS GAQARSVLDG LQADVVTLAL AYDIDALASK GLLDKGWQKR 120
  121 LPDNASPYTS TIVFLVRKGN PKHIKDWDDL IKPGVSIVTP NPKTSGGARW NYLAAWAYAE 180
  181 HQPGGNDQKA KEFVGKLYKN AGVLDSGARG ATTSFVQRGI GDVLIAWENE AFLSLKEFGP 240
  241 DKFEIVVPSV SILAEPPVAV VDKVVDRHGT RKVAEAYLNF LYSEEGQEIA AKNFYRPRSN 300
  301 KVPAELTAKF PKLKLYTVDD SFGGWTNAQK THFADGGVFD SIYQPQ

Type	Start	End	Confidence
Signal Peptide	1	35	0.97
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	346	0.99