YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71673746, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKCILGFI LFLLTLTLTI LHGSVISKNT NDYQLSNQIK EVKTWQTSEL EKEQYNFYQS  60
   61 SEEDFIKPQK FDHLQTVINK KDLPVYKNLS TSKPHSTYKV TDILWLLISS GLVFLMQPGF 120
  121 MCLESGLTRS KNNINVAFKN LTDFGISVFC FWSIGFAFMF GTSASGIIGH SNFFFATNVQ 180
  181 PLDAAFFLFQ VMFCGTATTI VSGAVAERMK FGTYLFVAFL VSGFIYPIFG HWAWNGIDTG 240
  241 VLRGWLGQRG FIDFAGSTVV HSIGGWVSLA TLLVIGPRTG RFPRDRPPEK IHGSNLPLSI 300
  301 LGVMLIWFGW FGFNGGSTLA LNEQVPGIIV NTIFSSVAGM ITGLSIGWSI RGIPGVDLII 360
  361 NGTLGGLVAI TASCHAVTTL SAVIIGFIGG IVTILVEQIL EKIRVDDAVG AIPVHLGAGI 420
  421 WGTLAVALFG KPEILGTGLS LSEQLTVQLL GVCTAFLLGF FVVYPILLIT NKFFLLRVST 480
  481 EDEHIGLNIS EHHAKTEILD LFEIMSSQAS TQDLTLRVPV EPFTLVGQIA ERYNHVMDTL 540
  541 EEVTTRNDAI IKLATDAIIT FNKSELEIIS VNPSAEKIFS YKPQDLVGMP IYEILDFTIN 600
  601 PLMREKIDSN DLITEGKKST VEALKLWVNP SFISFPTREI INAYYTFNFQ DIKPENLQSY 660
  661 FPNFIHLFDK NSADTQIELE TEKKITQKKY YIERLISLIA ETGNLYELVG IRKDGSLFPI 720
  721 EIAVREAKLN QKNFYTGTFR DISERKESEA KLKENEQRFR SLSTATFEGI IIYEQGKIVD 780
  781 ANTAALQMFK YELSEIIGMN GLELIDSKYK NLVWKNMSSG YEKPYEVVGI RKDNSTFPIE 840
  841 IQAKTFFYCS YQHRVSAIRD ITERKLAEKA LRESEEKFRA VMEQAADAFI IHDLQGKIVD 900
  901 VNQSTCQTLG YTYEELLHLF IEDIEINFVL EYLYQKWQKL IPGIPITLQG THKRKDGTTF 960
  961 PVEVRLGLLK AGNGNLVLAL CRDITERKKV EQALLLEQGK SEKLLLNILP KPIADKLKEN1020
 1021 QDIIAEGFDE VTVLFADLVG FTQLASSVYP KRLVYWLNEI FSKFDLLAEK YGLEKIKTIG1080
 1081 DAYMVVGGLP TPMENHAEAI ALIAIDMREE LAHFAHKSKQ DFLIRIGINT GPVVAGVIGR1140
 1141 KKFIYDLWGD TVNIASRMES QGIPGVIQVT EATYQILKHK FLFTERGLIH IKGKGYMKTY1200
 1201 FLQGKKVIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle