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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71672847, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLDLSPAWI SLKTATVTTI ITFFLGIATA RWMLGYRGKN KGLIDAILTS PLVLPPTVTG  60
   61 FLLLLLLGRN GPVGHLLSSM GITLIFTWPA TVIAATVVSF PLMYKTSLAA FNQIDTSLLA 120
  121 CARTLGASEW RVFWRILLPL AKPGIIAGAL LAFARSLGEF GATLMLAGSI PGKTETIPIA 180
  181 IFFASEGGNM KEALIWVLVI LAISLGVITG VNFWSESQIK KRIVQKTEKQ IIDVRSITQV 240
  241 QPQPFLLNSR SQSQSLFVDI QKQLHGFMLD VAFSANNKPV GLLGGSGAGK SMILRCIAGL 300
  301 ENPTQGRIVL NGRVLFDAKL KIDLPSRDRH VGYLFQNYAL FPHLTVAENI AFGLPKGLSS 360
  361 SDIQQKVQTH LLAVQLPGYE KRYPGELSGG QQQRVALARA LASQPEALLL DEAFSALDTH 420
  421 LRHQIETLVL STLENYQGVT LLVTHNLEEA YRICQHLLVV DDGLILTHGL KQDIFEYSTS 480
  481 VRVAQLTGCK NFSQVLIIDD HKIEAVEWGC SLEVAEPIPE YFSHVGIRAH QITFMEEANQ 540
  541 PNTFPCWLAA TSETQHRMTL YLKLYQPALN SFDYHLQAEV FKEKWYQIKN NPFPWQVCLH 600
  601 PFRLLLLEDT YRNHMLTGTL KSSQKLFW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle