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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48895279, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIYSGNRL IFIKNTQMRT TLMLQWLLPS ILSIFVLGSP SEAATLESWQ FKVNQNELSF  60
   61 TTEGGVQPKA QLATNPTRLI IDLPGTTLGS VRPSQAIGRA IKAIRVEQFD SQTARIVVEL 120
  121 NNGYTIDPKQ VQFRGISPSE WTVQIPSPQQ ITSTTNTDIN FAPQSSPPPP QTLQQPSPPL 180
  181 LLSPPLPFLK KERSSNQNRT RPTNSPLVNQ VTTTGTPTLV EDVQIKKEGV VLKTSGRLPE 240
  241 IELKKSVDRT WMTIDVLNST LTAKGLKPSQ RFNESGLTIT QLTQLSTSPA VVRLTLSLPD 300
  301 KRTQWQARAY AGGIAVWPEG EVQPTINEAT GFVFLKSVEL KNGTELVVTA DKPINYTSGW 360
  361 DSETGAYGIT IYNAKIDDRF RLPKREVGSP LIWAKIRQED PETVTILVKP ATNVKIAEVT 420
  421 QVTTQQLSLL MGWGNIGTAP PGWRPNSIEP SSSSKPSLFP RRYNSSSPNS LGENSLPQNR 480
  481 LPRNSPENLR PRRWPFTWPR RNNQRSLNND RRFPLQNQLP QSDGRVMIVI DPGHGGPMDF 540
  541 GGVGFGGMRE KDIVLPMSLE VAQILEQNNI QVVMTRKTDR DLDLPPRSEL ANRVGADLFV 600
  601 SIHANAISMS RPDVNGLETF YYQSGQVLAQ YIQNSMLEAF PTMNNRGVKR ARFHVLRHTK 660
  661 MPAALVEVGF VTGNYDSRIL ADPGQRSRMA QAIARGILKY VQVYYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle