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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89304705, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLFNNKSDF ISFQNIQYQI SKNNKIFQKK SNKKQILHNL SGYFKSGLNA ILGSSGAGKT  60
   61 TFLNILAKRI EQVLYQKQLI TKSIQIKRKN DNNDLNGTLK INNQNYDADS FSKFSGYVMQ 120
  121 EDLLLSNLTV KEYITFAADI RLSLPKEVKS QRIYNIIKQL KLEHCQDTII GDQNSKGISG 180
  181 GEKKRCCIGI ELIGQPQVLF LDEPTSGLDS FTAYQIIWIL KQLSEKQNSI IIFTIHQPTT 240
  241 DIWQLFDRVL LLIEGQLIYQ GLQTNTISYF SQMGYQCPLN SNPADYFMQL MSNQDQQILK 300
  301 IFIENYNKNL LPDTLLQIEE SNKHLESSNL SLPQKMAKLS FAYEIGALLK RQILNLKRHR 360
  361 LLVKTRFIQV IINGIITGAI YWQLKRDNQN MQDSLQIAKC LYLLALGIFY QSMNPQVLSF 420
  421 TQERPVFLKE QSSQMYSTFP YFLSKLIPEL FSCSMFAVLM SCIVYWMIGF ARTAEQFFFF 480
  481 VLTFIITTNV GNVTGLLAGS IFKSASVAVP FASTFVLPLF LFGGVFKNRS TYPEWIGWIE 540
  541 YINPSFYSFN ALAENEFQNT TFQYNPIQIY HLNFGKWNSI LMLIVLYFAF AIIAYLCLRR 600
  601 HQSNLLNSQI TDDSCTRFDE NSMSSENRRD SVQSSSKRIR KLSMEEVDLL KKYRKGREKN 660
  661 VIKVRQMRKN TQNLRENFKA IKENMIEYLE KIDSLIDERC EEIESKVNQL ESDCIIPEIE 720
  721 DIRNNYDSQK SKDEDHFNQE LLESNVNDQH LEIISKLIEC KRNVSGDFDS TQNHKANVLS 780
  781 EYIQQLNQCI SHLHEYIDED QSQLLKSLKC IQNINYLKLL QKLREKNYIK SDLVESIMLQ 840
  841 VERSDFTTNP YEDRAQQIGF STTISAPHMH AYTLEILKEH AQESMKCLDI GIGSGWMTTA 900
  901 LAKLMKDESA ICYGLDHLQG VLNISKKNIM KNHKELLESG KIVLVKGDGR EGLEDYAPFD 960
  961 IIHLGAAATL KAVNKFIHQL APNGILVGPI IKDTYSQEFM IIRKNAEGQI SKHTLLHVTY1020
 1021 GSLVAVEEQY QGSDEEEYYE NAEDQITFQQ QVIHVEKKPE CELEDEENLF QDLSDNEDED1080
 1081 EDEEANIGTS NFFRSILSTG RTDSLLNRLN NYQHVLRNIF SPSNFNYLNR DPQQEPHPQQ1140
 1141 QQQQQQQQQP QQQQEEHENS ENQQQEQAQQ QHQENQNQME INEQQFNENQ NRQNQANNQH1200
 1201 EISTSNTVNN ENIFQSGSHE GITQEEDHTQ LDQQKQQDNQ NLNGNNENNE IDENQV

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