YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60469261
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSITKIFLI LGLFAFLLVA FAPSSSVATV NLESDGYTEA EAKLIEEKGE KFTFQTEVNK  60
   61 LMNIIINSLY SKKEIFLREL ISNASDALDK IRFLALTNAD LLGEGEQSNL DIHIKIDKAN 120
  121 NVLHITDRGV GMTKDELVRN LGTIAQSGTK EFIKKVSDSA ESSNLIGQFG VGFYSLFLVA 180
  181 DSVVVTSKSN DDDQYVWTSD SQSSYTIAKD PKGNTLGRGT RISLHIKDDS KEFLDQEVIK 240
  241 QLVKKYSQFI NFPIYLYVSE EVEIPKEEQE DSKPITDDQV EETTTTTEEG EEETTTEEEG 300
  301 QTEEKKTKTV YKWEELNDSK PLWMKAAKDV TKEEYTEFFR SLSKTQDTPI TYSHFKTEGD 360
  361 TEFRSILYIP ENPPSNMFDL EAAGSGLKLF VRRVFITDNL KELVPNWLRF LVGVIDSDDL 420
  421 PLNVSREMLQ QNKILDAIKK KVIGKFISMI KELSEDEDKT KYNEFFKKFG SSMKLGAIED 480
  481 QANKKRLTKY LLFPSSKEEL TTFAGYVERM KEGQDQIYFI TGKSKDSVEA SPLIEQAIKK 540
  541 GYEVLFLVDP IDEYLVPQLD KFDDKYKFTN LARSGVKFNE DKEEEDQRKQ TAEEFKPLLS 600
  601 YLKKTLSDKL EKVVISKVLA DSPSILVSNS WGVTANQERI MKAQAHQANA QPQFNSKKIM 660
  661 EINPSHPLIK KLLNRLNEFG EEDETTKVSA HVLYETSALT AGYSIDNPTN FADFIYKLMM 720
  721 INGDSLAQTN FETTKNENSG PSVSFGDDDE NQQQDFQQPP QSTHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle