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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60474892
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNKYIIFLY LFVLISHIYC VPPKCITTKN IYKDGQVFGD GVTIEKNVEW WFLEQLGHSK  60
   61 GSIYTDNTLK GGSSEINEIA NYNIRDPKEP NPITSTYKQS LPNESKKIIY NSLTYNDQIS 120
  121 GGSDSAHAKG FFIWNEEGGI HVIHSVPKSP ETGYEPLFNY DKDTLNNQHA QHSICITLSK 180
  181 EELHIIPKYI IYSNLNIQTI NTVSTGLGKK AKKVSSANLY SENLHTEVEK ISPGVINLDV 240
  241 IENLAKEIPK TFKKLDGLMS DYILVKKKND GDPDIWNGII YLNKWSQLAK LILNEDITSS 300
  301 DLTLKPKETN VHYNKIYESK NKGDYFIQTT NKNLYKKYNE KIEETHKEKI KFFIIWHYID 360
  361 NFKNGNNFKT MVHTQTKITK GENAISQAVE SIYLSYRFET PWSKVISADS GSDHSKISYQ 420
  421 FNNIDKVDSG GGGGTICFGD LNWQGKQESR GGGAFCSDKM KYLSEYFYRR VGIIRHPENN 480
  481 QYLKKESLRL NSIAGQKLNL NGLIAKYPKD LNKILGNRKL DFETKVKGYG DDEKYYHLNP 540
  541 FIIVYNNEKD EDKLFSNEYN YGYDNVYIPL LTQLKDQTTN EYKSELFDFN VFPSINGEII 600
  601 LCDDNDDVTC SFEKSKSYQL FKDIYVESTL TVTSSKNKDG KETITAITQN TVIEPTSILA 660
  661 PFPDKIYIDL KNIDLVKELY KKLKFIKNEN IIQLKEVKIK DDLEPFKFPN KIEGDQSDSE 720
  721 EGHDDKDYNE INKKICKAYP SDTDSKIINY HPDCQDHLIY CILLTENKHG DLQNINSIEE 780
  781 FTKVLGEYTK DIKPNGALRN KKKKQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle