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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE42896
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKTDGFVT RIHTTTPNTT ITSISAAKFD IVEDRENERT RTTLRIVTGS GFKQFVWRLG  60
   61 LVLLIMATLL TLLLLFATPI AIRAEEFVWP EPSNAIERKF EKAALTSDNA ACSKIGGEIL 120
  121 RKGGNSIDAS IASMFCLGVV NPQSSGIGGG FLMTYFDQKS GDCYSIDARE TAPAAASRDM 180
  181 FLNDSDGSKY GFKAAGTPGE IAGYWHIFKK FGSGKVTWKE LVQPSVKLAR EGHPVSPYLA 240
  241 TVMKVKERHF RLFPSVKHWI NPETNDTYQS GDLLKRPKLA KTLERLGNSP NPVQLFYHGE 300
  301 MAKTLAKEFQ EGGGLITEQD LANYKVREYV NSNSNDHFRG TLTMCGGPPP SSFGVTQLIV 360
  361 SAMSKLFPEG HKDDIYNDPK VLHKYIEAMK FAYAQRTLLG DHDFVKGALE LSKNLTTPEY 420
  421 TQWVIDRMTD KAQSSKNYGG IAQYVPPDHG TSHVSAMDQY GNGVSATTTI NRWFGAAVES 480
  481 SEYGILWNDE MDDFSTPGME NGFGFAPSET NFIEPGKRPM SSMSPMVIFD HVTKKVRMVI 540
  541 GGSGGSKIIS ALAKSIVRSL IFHDSIKKAI DAPMIHNQFT PDITQLDDEF PINMKNILES 600
  601 EYLQKFRNTT GFEGIIQGVN VLNDGIYACG DYRRKTDQEP SGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle