YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE37896
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFFKKVIG WWNNLNIFVR IAIPVLIFTV IWLIPRPYNY WWIRTSLYCD GKRNDEQKYL  60
   61 VIPMLTTITD SGLGNQLFEV VSLLGMAEVL NRTAIFNKDD TMLNEKLSFF RETVPRVAEK 120
  121 VASMPIEISK SARFVAPVAC CYYQYTGLLT CDQSKFLVID GMHFQSYKYF APIESTIRQL 180
  181 LKPTPEELAR ISMKNQEEGR HGYHLIYIQQ NLKSLMFSTC VHVRRGDFVA DSQHTGTDET 240
  241 FTIKAIEYLF TKYSGTIYMI SNDPDWVGEH IVNHVAFRND MKVLRTPNNR AIDDLYFSQV 300
  301 YCDSVLITAP SSTFGWWIGY LSKNQSAVYY RDIRETTDEV KYQMVEEDFF PETWTKLRIS 360
  361 DML

Type	Start	End	Confidence
Cytoplasmic	1	15	0.78
Transmembrane Helix	16	34	0.95
Non-Cytoplasmic	35	363	0.82