YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ECHM_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRALLPR VRAPLRPWLF CPVQRSFASS AAFEYIITAK KGRNSNVGLI QLNRPKALNA  60
   61 LCNGLIVELN QALQAFEEDP AVGAIVLTGG EKVFAAGADI KEMQSLTFQN CYSGGFLSHW 120
  121 DQLTRVKKPV IAAVNGYALG GGCELAMMCD IIYAGEKAQF GQPEILIGTI PGAGGTQRLT 180
  181 RAVGKSLAME MVLTGDRISA QDAKQAGLVS KIFPVETVVE EAIQCAEKIA SNSKIVTAMA 240
  241 KESVNAAFEM TLAEGVKLEK KLFYSTFATE DRKEGMAAFV EKRKANFKDQ

Type	Start	End	Confidence
Signal Peptide	1	31	0.84
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	290	0.99