YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_BACSK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLILMGLPG AGKGTQAEKI VNDYGIPHIS TGDMFRAAMK NETELGLKAK SFIDAGDLVP  60
   61 DEVTIGIVKE RLSEDDCENG FLLDGFPRTI AQAEALEGIL SSLGKQLDHV LNIAVPKELL 120
  121 MERLTGRRVS PTTGKTYHIV YNPPKVEGKC DIDGSDLIQR DDDKPETVKR RLEVNEKQTK 180
  181 PLIDFYEAKG YLRQVDGNQD MNTVYADIKA ILSEKRA

Type	Start	End	Confidence
Signal Peptide	1	17	0.54
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	217	0.99