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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113886710, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSAAIKIP LSFLSSGLAK SVIGIALVFG FLPSSFAANR LMDVKYHALV DHQLEVELVF  60
   61 EDAISAPKID SNAAPAQLVL TFDDSISGLS KDRLPINQVG VKDIVTTQQD ANLMVTLGLS 120
  121 KVKPYQGSVV GNSYRLTIND EVAGSQAGNN PFVNSVKNID FRRNANGGGD LLVYLNNRSV 180
  181 AANVEQIGAK LEVQLYNTDI NSDLLYVMDV QDFSTPVKHF ETFKDDLTTR ILVDVSGNYE 240
  241 FNYKQEDNLF RLSINKVERA AATKEVKKYN GKTLSLNFQN ISVRTVLQII ADYNNFNLVT 300
  301 SDTVEGDITL RLDDVPWDQA LDLILQTKGL DKRIEGNILM VAPSEELAIR ESQNLKNKQE 360
  361 VKELAPLYSE YLQINYAKAT DIAELLKGAD SSLLSPRGSV AVDERTNTVL VKDTAEIIEN 420
  421 IHRLVEVLDI PIRQVLIESR MVTVKDDVSE DLGIRWGVTD QQGSKGTSGT LEGAGSIANG 480
  481 TVPTLDNRLN VNLPAAVTNP TSIAFHVAKL ADGTILDLEL SALEQENKGE IIASPRITTS 540
  541 NQKAAYIEQG VEIPYVQSTS SGATSVTFKK AVLSLRVTPQ ITPDNRVILD LEITQDSQGK 600
  601 TVDTPTGPAV AIDTQRIGTQ VLVDNGETIV LGGIYQQNLI SRVSKVPILG DIPLVGFLFR 660
  661 NTTDKNERQE LLIFVTPKIV NEKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle