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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82499409, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLYRAHVLV CGGTGCTSGG SDKIYDAFLK EIENFNLKDE VQVIRTGCFG LCAEGPIVIV  60
   61 YPEGAFYSKV ADSDVKEIVE EHLLKGRIVK RLLYKESLEE GQIRSLNEVK FYKKQMRIAL 120
  121 RNCGVINPEN IEEYIAYDGY KALAKVLTEM TPEQVIDWVK RSGLRGRGGG GFPTGLKWEF 180
  181 AAKAPGDVKY VVCNADEGDP GAYMDRSILE GDPHSVIEAM AIAGYAIGSK QGYVYVRAEY 240
  241 PLAVKRLEIA INQAREYGLL GKNILGTDFE FDIEIRLGAG AFVCGEETAL MTSIEGHRGE 300
  301 PRPRPPFPAV KGLWSKPTLL NNVETYANIP VIILKGPEWF ASIGTEKSKG TKVFALVGKV 360
  361 NNTGLIEVPM GTTVREIVED IGGGIPGGKK FKAVQTGGPS GGCIPASLMD TPIDFDSLTA 420
  421 LGTMMGSGGM IVMDEDTCMV DIAKFFLEFT VDESCGKCPP CRIGTRRMLE ILQKITSGNG 480
  481 TEEDLEKLEE LAYSIKDSAL CGLGQTAPNP VLSTLRYFRD EYEAHVKEKR CPAGACKALL 540
  541 RIVIDKDLCK GCGICAKNCP ANAITGQIKK PFEIDQEKCI KCGVCIEKCP FKAISKKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle